Photo by Killari Hotaru on Unsplash
Abstract: The global proliferation of plastic waste, particularly polyethylene terephthalate (PET), poses a significant environmental hazard due to its chemical recalcitrance and accumulation in terrestrial and aquatic ecosystems. Simultaneously, the pharmaceutical industry faces increasing pressure to adopt greener, more sustainable production methods, especially for high-demand drugs like acetaminophen (paracetamol), which is conventionally synthesized from petroleum-based feedstocks through energy-intensive processes. Bridging these two critical challenges, recent advances in synthetic biology have enabled the engineering of Escherichia coli to convert enzymatically depolymerized PET waste into acetaminophen. This dual-functional platform involves two major innovations: first, the enzymatic degradation of PET into its monomeric constituents, particularly terephthalic acid (TPA), using PETase and MHETase enzymes derived from Ideonella sakaiensis and other microbial sources; and second, the integration of a synthetic metabolic pathway in E. coli that transforms TPA into acetaminophen through a series of bioengineered enzymatic steps. This process exemplifies a sustainable and circular approach to chemical manufacturing—transforming a ubiquitous pollutant into a life-saving pharmaceutical under mild, environmentally compatible conditions. This article explores the scientific basis, pathway design, technological challenges, and broader implications of this bio-conversion strategy, marking a pioneering leap toward circular biomanufacturing, waste valorization, and eco-friendly drug synthesis.
Plastic has become an indispensable material in the modern world, with global production exceeding 400 million metric tons annually. Among the myriad plastic polymers, polyethylene terephthalate (PET) is especially prominent, constituting a significant proportion of packaging materials, particularly in the beverage, food, textile, and cosmetic industries. Its popularity stems from advantageous properties—transparency, tensile strength, barrier resistance, and durability. Ironically, these very attributes make PET one of the most persistent and environmentally problematic forms of plastic.
Unlike organic matter, PET resists microbial degradation, and conventional recycling systems remain inefficient. Mechanical recycling—the predominant strategy—results in polymer downgrading, where PET is melted and reformed, but with degraded mechanical properties and contamination risks. The global recycling rate for PET remains dismally low, hovering around 20–30%. The rest accumulates in landfills, oceans, and natural habitats, fragmenting into microplastics that infiltrate food chains, water systems, and even the human body. This growing environmental burden has escalated into a planetary crisis, demanding novel interventions that go beyond recycling toward full material valorization.
While plastic waste pollutes ecosystems, the chemical and pharmaceutical industries contribute significantly to greenhouse gas emissions, hazardous waste generation, and fossil fuel depletion. A quintessential example is acetaminophen (paracetamol)—an over-the-counter analgesic and antipyretic used globally. Despite its simple molecular structure, its traditional synthesis requires multiple energy-intensive steps, typically starting from benzene or phenol derivatives. The process involves nitration, reduction, and acetylation, with several toxic intermediates and reagents such as acetic anhydride, nitric acid, and strong reducing agents. These conventional methods produce considerable chemical waste, carry occupational hazards, and are rooted in non-renewable feedstocks.
Moreover, the pharmaceutical supply chain is susceptible to geopolitical and economic instabilities, as witnessed during the COVID-19 pandemic. The push for greener, localized, and resilient manufacturing systems has become a strategic imperative. It is within this context that biotechnological approaches—especially those powered by synthetic biology—are gaining prominence.
Synthetic biology offers a transformative lens to reimagine how chemicals and drugs can be manufactured—from scratch—by programming living systems. It combines principles of engineering with molecular biology to construct designer metabolic pathways within microbial hosts. These biological systems can convert renewable or waste-based carbon sources into high-value chemicals through environmentally benign processes.
Recent breakthroughs, particularly the study conducted by researchers at the University of Edinburgh, have illustrated this potential in a compelling way. By enzymatically depolymerizing PET waste into its monomeric form—terephthalic acid (TPA)—and introducing a synthetic pathway in Escherichia coli to convert TPA into acetaminophen, scientists have created a closed-loop biological system that tackles both waste accumulation and pharmaceutical sustainability.
This article presents a deep dive into this pioneering approach. It explores the fundamental chemistry of PET, the enzymology behind its depolymerization, the synthetic biology tools used to reprogram E. coli, the bioconversion steps leading to acetaminophen synthesis, and the broader implications for industrial biotechnology and environmental health.
Polyethylene terephthalate (PET) is a synthetic thermoplastic polyester composed of repeating units of terephthalic acid (TPA) and ethylene glycol (EG), linked via ester bonds. The polymer’s backbone consists of aromatic rings (from TPA) alternating with flexible aliphatic chains (from EG), forming a linear, semi-crystalline polymer. The presence of rigid benzene rings provides mechanical strength, while the ester linkages confer chemical stability and hydrophobicity.
These structural characteristics endow PET with exceptional clarity, tensile strength, gas barrier performance, and chemical resistance, making it ideal for applications such as beverage bottles, food containers, synthetic fibers (e.g., polyester clothing), and thermoformed packaging. However, they also render the material resistant to natural biodegradation. The crystallinity, in particular, restricts the penetration of water and enzymes, slowing hydrolytic cleavage and biological attack. This structural recalcitrance is a major reason why PET can persist for centuries in the environment, accumulating in soils, rivers, and oceans.
In addition, additives used during PET manufacturing—such as colorants, plasticizers, UV stabilizers, and antimony-based catalysts—further complicate biodegradability and downstream recycling, posing challenges for both enzymatic and chemical processing.
The main strategies for managing PET waste include mechanical recycling, chemical depolymerization, and incineration. Each method has intrinsic drawbacks.
Mechanical recycling involves collection, sorting, washing, shredding, melting, and re-extruding PET into new products. While relatively simple and cost-effective, this process:
To overcome the limitations of mechanical recycling, chemical depolymerization aims to break PET down into its monomers—TPA and EG—through methods like:
While these methods offer higher fidelity in monomer recovery and enable upcycling, they come with significant drawbacks:
Given the limitations of both mechanical and chemical recycling, researchers have turned to biological solutions that operate under mild conditions, use biodegradable catalysts (enzymes), and produce pure, recoverable monomers suitable for further transformation. In this context, enzymatic depolymerization of PET has emerged as a promising alternative—one that aligns with circular economy principles and enables integration with microbial metabolic pathways.
The success of this approach hinges on PETase enzymes, capable of hydrolyzing PET into TPA and EG, which can subsequently be assimilated by engineered microbes such as E. coli. These microbes, when endowed with synthetic biosynthetic pathways, can convert TPA into high-value chemicals—such as acetaminophen.
This sets the stage for a closed-loop biological valorization pathway, where waste PET becomes both feedstock and fuel for sustainable biomanufacturing.
The natural resistance of PET to degradation led scientists to believe for decades that biological degradation of synthetic plastics was highly improbable. However, this paradigm shifted dramatically in 2016 with the discovery of Ideonella sakaiensis 201-F6, a bacterium isolated from a Japanese recycling plant. This organism was found to secrete two crucial enzymes—PETase and MHETase—that could depolymerize PET under mild environmental conditions.
PETase initiates the process by hydrolyzing the ester linkages in PET, breaking it down into mono(2-hydroxyethyl) terephthalate (MHET), bis(2-hydroxyethyl) terephthalate (BHET), and some terephthalic acid (TPA).
MHETase then catalyzes the conversion of MHET into TPA and ethylene glycol (EG)—the monomeric building blocks of PET.
This enzymatic cascade was unprecedented, marking the first biological route to full depolymerization of PET at ambient temperatures. The discovery ignited a global effort to find, characterize, and engineer enzymes capable of efficiently degrading PET, especially crystalline and industrially processed forms.
Subsequent metagenomic studies and microbial screenings have identified PET-hydrolyzing enzymes from Thermobifida fusca, Humicola insolens, Fusarium solani, and various cutinase- and esterase-producing fungi and bacteria.
Despite its promise, native PETase from I. sakaiensis exhibits limited efficiency, especially against high-crystallinity PET—the most prevalent form in consumer products. To make enzymatic depolymerization industrially relevant, researchers have employed protein engineering strategies to enhance enzyme performance.
This involves introducing random mutations into the PETase gene and selecting for variants with improved activity or stability. High-throughput screening techniques are used to identify superior enzymes that hydrolyze PET more rapidly or under harsher conditions.
Using crystal structures of PETase and MHETase, scientists identify active-site residues, substrate-binding pockets, and surface loops critical for activity. Site-directed mutagenesis then targets these regions to:
Another breakthrough has been the construction of fusion proteins that combine PETase and MHETase in a single polypeptide chain. This substrate-channeling strategy ensures that intermediate products (like MHET) are rapidly converted, reducing product inhibition and improving overall yield.
These engineering efforts have significantly advanced the field toward commercial viability, making it possible to recover high-purity TPA and EG from waste PET streams.
The operational parameters for enzymatic PET degradation are relatively mild compared to traditional chemical methods:
The critical output of enzymatic depolymerization—terephthalic acid (TPA)—is not merely a recycled monomer. It can serve as a carbon feedstock for engineered microbial systems capable of biotransforming TPA into completely new compounds, including acetaminophen.
This transformation requires integrating enzymatic degradation with synthetic biology and metabolic engineering, which enables microbial hosts like E. coli to utilize TPA as a precursor in synthetic metabolic pathways. These pathways can produce pharmaceuticals that are traditionally synthesized from petrochemicals—heralding a shift from waste remediation to waste valorization.
Synthetic biology is a multidisciplinary field that applies engineering principles to biological systems. It aims to design, build, and optimize organisms—usually microbes—for novel functions, such as producing chemicals, materials, fuels, or pharmaceuticals from renewable or waste-derived feedstocks. The field is built upon three core principles:
Synthetic biologists use a powerful set of tools to manipulate life at the molecular level:
These capabilities enable scientists to transform ordinary microorganisms into cellular factories—or chassis organisms—programmed to perform new chemical transformations, including the conversion of non-native substrates like terephthalic acid (TPA) into valuable molecules like acetaminophen.
Among microbial chassis, Escherichia coli (E. coli) stands as the most widely used organism in synthetic biology and industrial biotechnology. Its popularity stems from several features:
E. coli has been successfully engineered to produce a broad range of products: biofuels (ethanol, butanol), bioplastics (PHAs), fine chemicals (vanillin, muconic acid), and pharmaceuticals (artemisinin precursor, taxol intermediates).
However, E. coli also presents challenges for non-native substrates like TPA:
Metabolic engineering involves the redirection of a microorganism’s metabolic pathways to maximize the production of a desired compound. This is achieved through a combination of:
Synthetic pathways are constructed by introducing heterologous genes encoding enzymes that do not exist in the host. In the case of PET-derived TPA, this includes:
Pathway flux is controlled by:
Unwanted side reactions consume precursors and reduce yields. These can be prevented by:
TPA, its intermediates, and even acetaminophen can be toxic to E. coli at elevated concentrations. Strategies to overcome this include:
While the primary focus is TPA-to-acetaminophen conversion, ethylene glycol (EG)—the other PET monomer—can also serve as a carbon source. E. coli can be engineered to catabolize EG via the glyoxylate pathway, feeding into central carbon metabolism to support cell growth and energy needs during bioproduction.
To bring synthetic pathways from the lab to industrial application, several additional considerations are vital:
Together, these synthetic biology and metabolic engineering strategies enable a new paradigm of chemical manufacturing, where waste-derived carbon becomes the raw material for life-saving drugs—all within the walls of a microbial cell.
Photo by Roberto Sorin on Unsplash
Acetaminophen, also known as paracetamol, is among the most widely used analgesic and antipyretic drugs worldwide. It alleviates mild to moderate pain and fever through its action on the hypothalamic heat-regulating center and central inhibition of cyclooxygenase enzymes (COX), especially COX-3 in the brain. Despite being on the World Health Organization’s list of essential medicines, its manufacturing process remains heavily reliant on non-renewable fossil fuel derivatives such as phenol and benzene.
The traditional chemical synthesis of acetaminophen typically involves:
This process, while industrially mature, suffers from several drawbacks:
Given increasing demand and the push for green chemistry, biotechnological routes for acetaminophen synthesis offer a compelling alternative—especially when paired with upcycled waste carbon such as PET-derived terephthalic acid (TPA).
Microorganisms, especially soil bacteria, have evolved sophisticated pathways for degrading aromatic compounds, including TPA. The biological breakdown of TPA typically involves the following steps:
In the context of acetaminophen biosynthesis, these intermediates can serve as precursors for p-aminophenol, the direct chemical precursor to acetaminophen.
Notably, protocatechuate (3,4-dihydroxybenzoic acid) is a critical intermediate that can be diverted toward aminated and acetylated products. Through careful pathway engineering, the carbon flux from TPA can be directed to p-aminophenol and finally to acetaminophen.
The transformation from TPA to acetaminophen involves several synthetic biology innovations. The pathway is de novo, meaning it does not exist naturally in any organism and must be fully constructed using genes from diverse sources.
Step-by-Step Pathway Design:
Using TPA dioxygenase and hydrolase enzymes from aromatic-degrading bacteria like Comamonas or Pseudomonas.
These enzymes open the aromatic ring or modify it to form protocatechuate.
Introduction of hydroxylation and amination steps.
Engineered enzymes such as aromatic amino transferases, aminohydroxylases, or non-heme iron oxygenases catalyze these reactions.
Possible intermediate: p-hydroxybenzoate → p-hydroxyaniline → p-aminophenol.
This final step is catalyzed by an N-acetyltransferase, which transfers an acetyl group from acetyl-CoA to the amine group of p-aminophenol.
Enzymes for this step can be sourced from organisms like Salmonella enterica or engineered variants of human NAT enzymes.
Key Considerations:
Example Hypothetical Pathway Overview:
PET → Enzymatic hydrolysis → TPA
TPA → Protocatechuate (via TPA dioxygenase)
Protocatechuate → p-aminophenol (via engineered hydroxylase + aminotransferase)
p-aminophenol + Acetyl-CoA → Acetaminophen (via N-acetyltransferase)
In a proof-of-concept reported by researchers at the University of Edinburgh, engineered E. coli strains achieved 90% molar yield of acetaminophen from TPA under laboratory conditions, all at room temperature and neutral pH—an unprecedented feat in green pharmaceutical synthesis.
While the primary focus of this platform is the conversion of TPA to acetaminophen, ethylene glycol (EG)—the second monomer released during PET hydrolysis—also represents a valuable carbon source.
This parallel valorization of EG can:
Future efforts may even engineer EG into the same product (e.g., via shunt pathways) or divert it to secondary pharmaceuticals or bioplastics, increasing overall process efficiency and value recovery.
This bio-based acetaminophen production strategy—starting from enzymatically degraded PET waste—demonstrates the full potential of combining synthetic biology, metabolic engineering, and enzymology. It exemplifies a closed-loop bioprocess that converts a persistent pollutant into a critical therapeutic compound, reshaping both waste management and pharmaceutical manufacturing paradigms
Despite the impressive scientific foundation, converting PET waste into acetaminophen at industrial scales presents several formidable technical challenges.
In laboratory settings, E. coli strains engineered for acetaminophen biosynthesis from TPA have achieved yields nearing 90% molar conversion. However, the volumetric productivity—the amount of acetaminophen produced per liter of culture—is still far below what is commercially viable. Achieving industrial-scale titers requires:
Even with high bioconversion efficiency, extracting pharmaceutical-grade acetaminophen from microbial fermentation broth presents another hurdle. The presence of residual TPA, aromatic intermediates, salts, and cell debris complicates purification. Effective DSP strategies include:
Each step must be designed for cost-effectiveness, scalability, and minimal solvent waste to maintain the green credentials of the process.
Real-world PET waste contains colorants, plasticizers, and co-polymers (e.g., polyethylene, PVC) that inhibit enzymatic hydrolysis and microbial activity. Efficient pre-treatment and sorting technologies are necessary to ensure consistent feedstock quality. Moreover:
Intermediates like protocatechuate and p-aminophenol can be cytotoxic, impairing microbial growth and pathway function. To address this:
Although the enzymatic and microbial conversion of PET to acetaminophen is environmentally favorable, it must also be cost-competitive with the current petrochemical route. Key cost drivers include:
Techno-economic assessments are ongoing to identify break-even points and bottlenecks in the process. Early-stage estimates suggest the approach may become viable with further strain optimization and process intensification.
Implementing this bio-based manufacturing model at scale requires investment in:
For a biologically derived drug like acetaminophen to enter the market, it must meet stringent regulatory standards:
The technology platform described for PET-to-acetaminophen conversion can be adapted to produce other aromatic-based compounds, such as:
Such modular biosynthetic frameworks could turn microbial platforms into general-purpose upcyclers of aromatic waste.
PET-based bioconversion could be integrated into multi-feedstock biorefineries, processing plastic waste alongside:
This would enhance economic resilience and feedstock flexibility, making full use of regional waste streams and lowering environmental impact.
The future of this technology lies in the deployment of:
These tools will accelerate the design-build-test-learn cycle, enabling faster deployment of optimized microbial strains for diverse conversions.
Public perception and policy support will play crucial roles. Policymakers can:
Effective science communication and stakeholder engagement are essential to build trust in biological solutions to environmental challenges.
The transformation of PET plastic waste into acetaminophen via engineered E. coli is more than a scientific novelty—it marks a paradigm shift in how we perceive waste and pharmaceuticals. In an age burdened by plastic pollution and unsustainable chemical manufacturing, this innovation demonstrates that waste carbon can be repurposed into life-saving medicines through the power of synthetic biology and metabolic engineering.
This approach tackles two of the most pressing global challenges in tandem:
By integrating enzyme-catalyzed depolymerization with genetically reprogrammed microbial biosynthesis, scientists have created a closed-loop bioprocess that converts an environmental liability into a valuable health commodity. The process operates under mild conditions, leverages renewable biocatalysts, and holds promise for scalability with further optimization.
The success of this platform illustrates the broader potential of synthetic biology to redefine industrial chemistry. It underscores the need to invest in bio-based infrastructure, policy frameworks, and public engagement to scale such innovations.
Most importantly, it reimagines plastic not as a waste product, but as a feedstock—a renewable resource for sustainable manufacturing. With continued research, interdisciplinary collaboration, and supportive governance, this "plastic to pill" approach could become a cornerstone of the circular bioeconomy, paving the way for a future where waste becomes health, and pollution becomes cure.
References: